miRBase entry: ssa-mir-212b-2

Stem-loop ssa-mir-212b-2


Accession
MI0026610
Description
Salmo salar ssa-mir-212b-2 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

ACCUUGGCUCUAGACUGCUUACUgcuuaaaacucauugUAACAGUCUACAGUCAUGGCU
.((.(((((.(((((((.((((...............))))))))))).))))).))..

Structure
-A  U     C       C    Ugcuua 
  CC UGGCU UAGACUG UUAC      a
  || ||||| ||||||| ||||      a
  GG ACUGA AUCUGAC AAUg      a
UC  U     C       -    uuacuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-212b-5p

Accession MIMAT0032512
Description Salmo salar ssa-miR-212b-5p mature miRNA
Sequence 1 - ACCUUGGCUCUAGACUGCUUACU - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-212b-3p

Accession MIMAT0032513
Description Salmo salar ssa-miR-212b-3p mature miRNA
Sequence 39 - UAACAGUCUACAGUCAUGGCU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482