miRBase entry: ssa-mir-24a-4

Stem-loop ssa-mir-24a-4


Accession
MI0026641
Description
Salmo salar ssa-mir-24a-4 precursor miRNA
Gene family
MIPF0000041; mir-24

Literature search
1 open access papers mention ssa-mir-24a-4
(1 sentences)

Sequence

UGCCUGCUGUGCUGAUAAUCAGUgugugagguuagcUGGCUCAGUUCAGCAGGAAC
..(((((((.(((((...(((((...........))))).))))).)))))))...

Structure
-UG       U     UAA     gugu 
   CCUGCUG GCUGA   UCAGU    g
   ||||||| |||||   |||||    a
   GGACGAC UGACU   GGUcg    g
CAA       U     --C     auug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-24a-4-5p

Accession MIMAT0032554
Description Salmo salar ssa-miR-24a-4-5p mature miRNA
Sequence 1 - UGCCUGCUGUGCUGAUAAUCAGU - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-24a-3p

Accession MIMAT0032555
Description Salmo salar ssa-miR-24a-3p mature miRNA
Sequence 37 - UGGCUCAGUUCAGCAGGAAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482