Stem-loop ssa-mir-24a-2

Accession

MI0026642

Description

Salmo salar ssa-mir-24a-2 precursor miRNA

Gene family

MIPF0000041; mir-24

Literature search

1 open access papers mention ssa-mir-24a-2
(1 sentences)

Sequence

UGCCUACUGAACUGGUAUCAGUuugaacucugaguacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((..(((((.............))))).))))))))).)))...

Structure

-UG   A         UA     uugaa 
   CCU CUGAACUGG  UCAGU     c
   ||| |||||||||  |||||     u
   GGA GACUUGACU  GGUca     c
CAA   C         -C     ugagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-24a-3p

• Accession: MIMAT0032555
• Description: Salmo salar ssa-miR-24a-3p mature miRNA
• Sequence: 38 - UGGCUCAGUUCAGCAGGAAC - 57
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-24a-5p

• Accession: MIMAT0032556
• Description: Salmo salar ssa-miR-24a-5p mature miRNA
• Sequence: 1 - UGCCUACUGAACUGGUAUCAGU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482