Stem-loop ssa-mir-26a-3

Accession

MI0026651

Description

Salmo salar ssa-mir-26a-3 precursor miRNA

Gene family

MIPF0000043; mir-26

Literature search

2 open access papers mention ssa-mir-26a-3
(6 sentences)

Sequence

UUCAAGUAAUCCAGGAUAGGCUgguuaacacaugcacggCCUGUUCUUGAUUACUUGUUUC
..(((((((((.(((((((((((((........)).))))))))))).)))))))))....

Structure

--UU         C           -  uaa 
    CAAGUAAUC AGGAUAGGCUg gu   c
    ||||||||| ||||||||||| ||    
    GUUCAUUAG UCUUGUCCggc cg   a
CUUU         U           a  uac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-26a-5p

• Accession: MIMAT0032563
• Description: Salmo salar ssa-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-26a-3-3p

• Accession: MIMAT0032565
• Description: Salmo salar ssa-miR-26a-3-3p mature miRNA
• Sequence: 40 - CCUGUUCUUGAUUACUUGUUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482