Stem-loop ssa-mir-29b-1

Accession

MI0026665

Description

Salmo salar ssa-mir-29b-1 precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

ACUGAUUUCUUCUGGUGUUUAGAgccccuuacagccuucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.(((((........))..))))))))))...)))))))))..

Structure

--         UUC       U   --  ccc 
  ACUGAUUUC   UGGUGUU AGA  gc   u
  |||||||||   ||||||| |||  ||    
  UGGCUAAAG   ACCACGA Ucu  cg   u
AU         UUU       -   uc  aca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-29b-1-5p

• Accession: MIMAT0032585
• Description: Salmo salar ssa-miR-29b-1-5p mature miRNA
• Sequence: 1 - ACUGAUUUCUUCUGGUGUUUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-29b-3p

• Accession: MIMAT0032586
• Description: Salmo salar ssa-miR-29b-3p mature miRNA
• Sequence: 40 - UAGCACCAUUUGAAAUCGGUUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482