Stem-loop ssa-mir-29c

Accession

MI0026669

Description

Salmo salar ssa-mir-29c precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

ACUGUUUUCUUUUGGUGUUUAGAgucucuucuauuucUAGCACCAUUUGAAAUCAGUUA
((((.((((...(((((((.((((..........)))))))))))...)))).))))..

Structure

--    U    UUU       U    ucuc 
  ACUG UUUC   UGGUGUU AGAg    u
  |||| ||||   ||||||| ||||     
  UGAC AAAG   ACCACGA Ucuu    u
AU    U    UUU       -    uauc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-29c-5p

• Accession: MIMAT0032590
• Description: Salmo salar ssa-miR-29c-5p mature miRNA
• Sequence: 1 - ACUGUUUUCUUUUGGUGUUUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-29c-3p

• Accession: MIMAT0032591
• Description: Salmo salar ssa-miR-29c-3p mature miRNA
• Sequence: 38 - UAGCACCAUUUGAAAUCAGUUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482