Stem-loop ssa-mir-33a-2

Accession

MI0026691

Description

Salmo salar ssa-mir-33a-2 precursor miRNA

Gene family

MIPF0000070; mir-33

Sequence

GUGCAUUGUAGUUGCAUUGCAugauccugcagcccauugCAAUGUGUCUGCAGUGCAGUA
.((((((((((..((((((((((...........)).))))))))..))))))))))...

Structure

--G          UU        -  aucc 
   UGCAUUGUAG  GCAUUGCA ug    u
   ||||||||||  |||||||| ||    g
   ACGUGACGUC  UGUAACgu ac    c
AUG          UG        u  ccga 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-33a-5p

• Accession: MIMAT0032618
• Description: Salmo salar ssa-miR-33a-5p mature miRNA
• Sequence: 1 - GUGCAUUGUAGUUGCAUUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-33a-3p

• Accession: MIMAT0032619
• Description: Salmo salar ssa-miR-33a-3p mature miRNA
• Sequence: 40 - CAAUGUGUCUGCAGUGCAGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482