Stem-loop ssa-mir-33b

Accession

MI0026692

Description

Salmo salar ssa-mir-33b precursor miRNA

Gene family

MIPF0000070; mir-33

Sequence

GUGCAUUGUAGUUGCAUUGCAugugucucagcugggugCAAUGUUCCUGCAGUGCAAGA
.((((((((((..(((((((((.(((....)).).)))))))))..))))))))))...

Structure

--G          UU         g -  c 
   UGCAUUGUAG  GCAUUGCAu u gu u
   ||||||||||  ||||||||| | ||  
   ACGUGACGUC  UGUAACgug g cg c
AGA          CU         g u  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-33b-5p

• Accession: MIMAT0032620
• Description: Salmo salar ssa-miR-33b-5p mature miRNA
• Sequence: 1 - GUGCAUUGUAGUUGCAUUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-33b-3p

• Accession: MIMAT0032621
• Description: Salmo salar ssa-miR-33b-3p mature miRNA
• Sequence: 39 - CAAUGUUCCUGCAGUGCAAGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482