miRBase entry: ssa-mir-375-1

Stem-loop ssa-mir-375-1


Accession
MI0026695
Description
Salmo salar ssa-mir-375-1 precursor miRNA
Gene family
MIPF0000114; mir-375


Sequence

ACGUUGAGCCACACGCACAAUAccugaagauuaaguUUUGUUCGUUCGGCUCGCGUUA
((((.(((((..(((.((((.((.(((...))).)).)))).)))..)))))))))..

Structure
--    U     AC   C    U  c   a 
  ACGU GAGCC  ACG ACAA Ac uga  
  |||| |||||  ||| |||| || ||| g
  UGCG CUCGG  UGC UGUU ug auu  
AU    -     CU   U    U  a   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-375-5p

Accession MIMAT0032625
Description Salmo salar ssa-miR-375-5p mature miRNA
Sequence 1 - ACGUUGAGCCACACGCACAAUA - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-375-3p

Accession MIMAT0032626
Description Salmo salar ssa-miR-375-3p mature miRNA
Sequence 37 - UUUGUUCGUUCGGCUCGCGUUA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482