miRBase entry: ssa-mir-375-2

Stem-loop ssa-mir-375-2


Accession
MI0026696
Description
Salmo salar ssa-mir-375-2 precursor miRNA
Gene family
MIPF0000114; mir-375


Sequence

ACGCUGAGCCACGCGCACAAUAcaugaugaagaugacguUUUGUUCGUUCGGCUCGCGUUA
((((.(((((..(((.((((.((.(.((....)).).)).)))).)))..)))))))))..

Structure
--    U     AC   C    U  a g  g 
  ACGC GAGCC  GCG ACAA Ac u au a
  |||| |||||  ||| |||| || | ||  
  UGCG CUCGG  UGC UGUU ug a ua a
AU    -     CU   U    U  c g  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-375-3p

Accession MIMAT0032626
Description Salmo salar ssa-miR-375-3p mature miRNA
Sequence 40 - UUUGUUCGUUCGGCUCGCGUUA - 61
Evidence experimental
Illumina [1]

Mature ssa-miR-375-2-5p

Accession MIMAT0032627
Description Salmo salar ssa-miR-375-2-5p mature miRNA
Sequence 1 - ACGCUGAGCCACGCGCACAAUA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482