miRBase entry: ssa-mir-449b

Stem-loop ssa-mir-449b


Accession
MI0026703
Description
Salmo salar ssa-mir-449b precursor miRNA


Sequence

AGGCAGUGUCUUGUUAGCUGAauggucuguuuuaucAGUUUACCUGUUGCUGCCCUC
.((((((..(..((.((((((.(((......))))))))).))..)..))))))...

Structure
--A      GU UU  U      a   uc 
   GGCAGU  C  GU AGCUGA ugg  u
   ||||||  |  || |||||| |||   
   CCGUCG  G  CA UUGAcu auu  g
CUC      UU UC  U      -   uu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-449b-5p

Accession MIMAT0032639
Description Salmo salar ssa-miR-449b-5p mature miRNA
Sequence 1 - AGGCAGUGUCUUGUUAGCUGA - 21
Evidence experimental
Illumina [1]

Mature ssa-miR-449b-3p

Accession MIMAT0032640
Description Salmo salar ssa-miR-449b-3p mature miRNA
Sequence 37 - AGUUUACCUGUUGCUGCCCUC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482