Stem-loop ssa-mir-455

Accession

MI0026705

Description

Salmo salar ssa-mir-455 precursor miRNA

Gene family

MIPF0000129; mir-455

Literature search

2 open access papers mention ssa-mir-455
(14 sentences)

Sequence

UAUGUGCCCUUGGACUACAUCGuggaaggcagcaccauGCAGUCCAUGGGCAUAUACACU
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))....

Structure

----         U      A   C   gaa 
    UAUGUGCCC UGGACU CAU Gug   g
    ||||||||| |||||| ||| |||    
    AUAUACGGG ACCUGA Gua cac   g
UCAC         U      C   c   gac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-455-5p

• Accession: MIMAT0032643
• Description: Salmo salar ssa-miR-455-5p mature miRNA
• Sequence: 1 - UAUGUGCCCUUGGACUACAUCG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-455-3p

• Accession: MIMAT0032644
• Description: Salmo salar ssa-miR-455-3p mature miRNA
• Sequence: 39 - GCAGUCCAUGGGCAUAUACACU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482