Stem-loop ssa-mir-462a

Accession

MI0026712

Description

Salmo salar ssa-mir-462a precursor miRNA

Literature search

2 open access papers mention ssa-mir-462a
(29 sentences)

Sequence

UAACGGAACCCAUAAUGCAGCUGugucaaugaacagcaCCUGGAUGUGGGUUCCGUCU
..((((((((((((.(.(((((((........)))))...)).)))))))))))))..

Structure

UA            A G  ---     guc 
  ACGGAACCCAUA U CA   GCUGu   a
  |||||||||||| | ||   |||||    
  UGCCUUGGGUGU A GU   cgaca   a
UC            - G  CCa     agu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-462a-5p

• Accession: MIMAT0032653
• Description: Salmo salar ssa-miR-462a-5p mature miRNA
• Sequence: 1 - UAACGGAACCCAUAAUGCAGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-462a-3p

• Accession: MIMAT0032654
• Description: Salmo salar ssa-miR-462a-3p mature miRNA
• Sequence: 39 - CCUGGAUGUGGGUUCCGUCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482