miRBase entry: ssa-mir-499b-3

Stem-loop ssa-mir-499b-3


Accession
MI0026719
Description
Salmo salar ssa-mir-499b-3 precursor miRNA
Gene family
MIPF0000173; mir-499


Sequence

UUAAGACUUGCAGUGAUGUUUAgggaaaugaucacaugAACAUCACUUUAAGUCUGUGCU
...(((((((.(((((((((((.(((.....)).).))))))))))).))))))).....

Structure
--UUA       C           g -  a 
     AGACUUG AGUGAUGUUUA g ga a
     ||||||| ||||||||||| | || u
     UCUGAAU UCACUACAAgu c cu g
UCGUG       U           a a  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-499b-5p

Accession MIMAT0032661
Description Salmo salar ssa-miR-499b-5p mature miRNA
Sequence 1 - UUAAGACUUGCAGUGAUGUUUA - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-499b-3p

Accession MIMAT0032662
Description Salmo salar ssa-miR-499b-3p mature miRNA
Sequence 39 - AACAUCACUUUAAGUCUGUGCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482