miRBase entry: ssa-mir-729

Stem-loop ssa-mir-729


Accession
MI0026734
Description
Salmo salar ssa-mir-729 precursor miRNA


Sequence

CAGGGUUGUAUCAUAACCAACCuguaugguuuagaagUAUGGGUAUGAUACGACCUG
..(((((((((((((.((((((.....))).........))).))))))))))))).

Structure
CA             A   ---------   u 
  GGGUUGUAUCAUA CCA         ACC g
  ||||||||||||| |||         ||| u
  UCCAGCAUAGUAU GGU         ugg a
-G             G   AUgaagauu   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-729-5p

Accession MIMAT0032677
Description Salmo salar ssa-miR-729-5p mature miRNA
Sequence 1 - CAGGGUUGUAUCAUAACCAACC - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-729-3p

Accession MIMAT0032678
Description Salmo salar ssa-miR-729-3p mature miRNA
Sequence 38 - UAUGGGUAUGAUACGACCUG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482