miRBase entry: ssa-mir-730a-1

Stem-loop ssa-mir-730a-1


Accession
MI0026735
Description
Salmo salar ssa-mir-730a-1 precursor miRNA
Gene family
MIPF0000134; mir-460


Sequence

UCCUCAUUGUGCAUGCUGUGUGuguuucuuauggguccaCACAGCGCCUGCAAUGUGGAGG
(((.((((((...(((((((((.(.(((....))).))))))))))...)))))).)))..

Structure
--   U      GCA         u u   u 
  UCC CAUUGU   UGCUGUGUG g uuc u
  ||| ||||||   ||||||||| | |||  
  AGG GUAACG   GCGACACac c ggg a
GG   U      UCC         - u   u 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-730a-5p

Accession MIMAT0032679
Description Salmo salar ssa-miR-730a-5p mature miRNA
Sequence 1 - UCCUCAUUGUGCAUGCUGUGUG - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-730a-3p

Accession MIMAT0032680
Description Salmo salar ssa-miR-730a-3p mature miRNA
Sequence 40 - CACAGCGCCUGCAAUGUGGAGG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482