miRBase entry: ssa-mir-7a-6

Stem-loop ssa-mir-7a-6


Accession
MI0026750
Description
Salmo salar ssa-mir-7a-6 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

UGGAAGACUAGUGAUUUUGUUGUgaugcugagcaaugagaauaaCAACAAGUCCCAGUCUGCCUCU
.((.(((((.(.(((((.(((((....((.(....).))....))))))))))).))))).))...

Structure
--U  A     A U     U     gaug  g g 
   GG AGACU G GAUUU GUUGU    cu a c
   || ||||| | ||||| |||||    || |  
   CC UCUGA C CUGAA CAACa    ga u a
UCU  G     C -     -     auaa  g a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-7a-5p

Accession MIMAT0032693
Description Salmo salar ssa-miR-7a-5p mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
Evidence experimental
Illumina [1]

Mature ssa-miR-7a-6-3p

Accession MIMAT0032699
Description Salmo salar ssa-miR-7a-6-3p mature miRNA
Sequence 45 - CAACAAGUCCCAGUCUGCCUCU - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482