Stem-loop ssa-let-7b-2

Accession

MI0026753

Description

Salmo salar ssa-let-7b-2 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

2 open access papers mention ssa-let-7b-2
(7 sentences)

Sequence

UGAGGUAGUAGGUUGUGUGGUUucaggguugugauuuugccccaucaggaguuaaCUGUACAACCUACUGCCUUCCC
.(((((((((((((((((((((...((.((.((((........)))).)).)))))))))))))))))))))))...

Structure

--U                     uca  g  g    uuu 
   GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   g
   |||||||||||||||||||||   || || ||||    
   UUCCGUCAUCCAACAUGUCaa   uu ag acua   c
CCC                     ---  g  g    ccc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-let-7b-5p

• Accession: MIMAT0032701
• Description: Salmo salar ssa-let-7b-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUGUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-let-7b-3p

• Accession: MIMAT0032702
• Description: Salmo salar ssa-let-7b-3p mature miRNA
• Sequence: 56 - CUGUACAACCUACUGCCUUCCC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482