Stem-loop ssa-let-7e-2

Accession

MI0026757

Description

Salmo salar ssa-let-7e-2 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

2 open access papers mention ssa-let-7e-2
(5 sentences)

Sequence

UGAGGUAGUAGAUUGAAUAGUUgugggguauauguccucccucugagauaaCUAUACAAUCUACUGUCUUUCC
.((((((((((((((.((((((((((((..........)))).....)))))))).))))))))))))))...

Structure

--U              A        -----    uaua 
   GAGGUAGUAGAUUG AUAGUUgu     gggg    u
   |||||||||||||| ||||||||     ||||     
   UUCUGUCAUCUAAC UAUCaaua     uccc    g
CCU              A        gaguc    uccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-let-7e-5p

• Accession: MIMAT0032705
• Description: Salmo salar ssa-let-7e-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGAUUGAAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-let-7e-3p

• Accession: MIMAT0032706
• Description: Salmo salar ssa-let-7e-3p mature miRNA
• Sequence: 52 - CUAUACAAUCUACUGUCUUUCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482