Stem-loop ssa-mir-92a-1

Accession

MI0026758

Description

Salmo salar ssa-mir-92a-1 precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

3 open access papers mention ssa-mir-92a-1
(5 sentences)

Sequence

AGGUUGGGAUAGGCAGCAAUGCUcauuacuuguauggUAUUGCACUUGUCCCGGCCUGU
(((((((((((((..(((((((.(((.......)))))))))).)))))))))))))..

Structure

--             CA       U   ua 
  AGGUUGGGAUAGG  GCAAUGC cau  c
  |||||||||||||  ||||||| |||  u
  UCCGGCCCUGUUC  CGUUAUg gua  u
UG             -A       -   ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-92a-5p

• Accession: MIMAT0032707
• Description: Salmo salar ssa-miR-92a-5p mature miRNA
• Sequence: 1 - AGGUUGGGAUAGGCAGCAAUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-92a-3p

• Accession: MIMAT0032708
• Description: Salmo salar ssa-miR-92a-3p mature miRNA
• Sequence: 38 - UAUUGCACUUGUCCCGGCCUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482