miRBase entry: ssa-mir-92a-3

Stem-loop ssa-mir-92a-3


Accession
MI0026760
Description
Salmo salar ssa-mir-92a-3 precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
4 open access papers mention ssa-mir-92a-3
(6 sentences)

Sequence

AGGCUGGGAGGGGUGUCAGUGCUguuacucugaaggUAUUGCACUUGUCCCGGCCUGU
(((((((((.(((((.(((((((.(((...))).)))))))))))).)))))))))..

Structure
--         G     U       g   c 
  AGGCUGGGA GGGUG CAGUGCU uua  
  ||||||||| ||||| ||||||| ||| u
  UCCGGCCCU UUCAC GUUAUgg agu  
UG         G     -       a   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-92a-3p

Accession MIMAT0032708
Description Salmo salar ssa-miR-92a-3p mature miRNA
Sequence 37 - UAUUGCACUUGUCCCGGCCUGU - 58
Evidence experimental
Illumina [1]

Mature ssa-miR-92a-3-5p

Accession MIMAT0032709
Description Salmo salar ssa-miR-92a-3-5p mature miRNA
Sequence 1 - AGGCUGGGAGGGGUGUCAGUGCU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482