Stem-loop ssa-mir-9a-4

Accession

MI0026772

Description

Salmo salar ssa-mir-9a-4 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

UCUUUGGUUAUCUAGCUGUAUGAgugauguacauucuucAUAAAGCUAGAUAACCGAAAGU
..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))...

Structure

-UC               G      u  ug 
   UUUGGUUAUCUAGCU UAUGAg ga  u
   ||||||||||||||| |||||| ||  a
   AAGCCAAUAGAUCGA AUAcuu cu  c
UGA               A      -  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-9a-5p

• Accession: MIMAT0032721
• Description: Salmo salar ssa-miR-9a-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-9a-4-3p

• Accession: MIMAT0032725
• Description: Salmo salar ssa-miR-9a-4-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482