Stem-loop ssa-mir-7132b

Accession

MI0026778

Description

Salmo salar ssa-mir-7132b precursor miRNA

Literature search

1 open access papers mention ssa-mir-7132b
(11 sentences)

Sequence

GACUUGGUCAAAGCUCCUCAGCagauguuucagagaauccUGAGGCGUUUAGAACAAGUUCA
((((((.((.((((.((((((..(((..........))))))))).)))).)).))))))..

Structure

--      G  A    U      Ca   guuu 
  GACUUG UC AAGC CCUCAG  gau    c
  |||||| || |||| ||||||  |||     
  UUGAAC AG UUUG GGAGUc  cua    a
AC      A  A    C      --   agag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7132b-5p

• Accession: MIMAT0032732
• Description: Salmo salar ssa-miR-7132b-5p mature miRNA
• Sequence: 1 - GACUUGGUCAAAGCUCCUCAGC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7132b-3p

• Accession: MIMAT0032733
• Description: Salmo salar ssa-miR-7132b-3p mature miRNA
• Sequence: 41 - UGAGGCGUUUAGAACAAGUUCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482