miRBase entry: ssa-mir-2184

Stem-loop ssa-mir-2184


Accession
MI0026784
Description
Salmo salar ssa-mir-2184 precursor miRNA

Literature search
1 open access papers mention ssa-mir-2184
(5 sentences)

Sequence

AACAGUAAGAGUUAAUGUGCUGgguucucaaucaGCACGUAGGCUCUUACAGUACA
.((.(((((((((.(((((((((........))))))))).))))))))).))...

Structure
--A  A         A         guu 
   AC GUAAGAGUU AUGUGCUGg   c
   || ||||||||| |||||||||    
   UG CAUUCUCGG UGCACGacu   u
ACA  A         A         aac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssa-miR-2184-5p

Accession MIMAT0032744
Description Salmo salar ssa-miR-2184-5p mature miRNA
Sequence 1 - AACAGUAAGAGUUAAUGUGCUG - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-2184-3p

Accession MIMAT0032745
Description Salmo salar ssa-miR-2184-3p mature miRNA
Sequence 35 - GCACGUAGGCUCUUACAGUACA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482