miRBase entry: ssa-mir-7552b

Stem-loop ssa-mir-7552b


Accession
MI0026787
Description
Salmo salar ssa-mir-7552b precursor miRNA
Gene family
MIPF0001916; mir-7552


Sequence

CUACAAUUAAAGGAUAUUUCUUgugacugagcauauacggAAAUAUCUUGUAAUUGUUUGGU
..(((((((.(((((((((((((((......))))...))))))))))).))))))).....

Structure
---CU       A           ---    ac 
     ACAAUUA AGGAUAUUUCU   Ugug  u
     ||||||| |||||||||||   ||||   
     UGUUAAU UUCUAUAAAgg   auac  g
UGGUU       G           cau    ga 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssa-miR-7552b-5p

Accession MIMAT0032750
Description Salmo salar ssa-miR-7552b-5p mature miRNA
Sequence 1 - CUACAAUUAAAGGAUAUUUCUU - 22
Evidence experimental
Illumina [1]

Mature ssa-miR-7552b-3p

Accession MIMAT0032751
Description Salmo salar ssa-miR-7552b-3p mature miRNA
Sequence 41 - AAAUAUCUUGUAAUUGUUUGGU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23865519
    Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
    Andreassen R, Worren MM, Høyheim B
    BMC Genomics (2013) 14:482