miRBase entry: ath-MIR8177

Stem-loop ath-MIR8177


Accession
MI0026807
Description
Arabidopsis thaliana ath-MIR8177 precursor miRNA

Literature search
1 open access papers mention ath-MIR8177
(1 sentences)

Sequence

GUGUGAUGAUGUGUCAUUUAUAcggagagaguuaaccaacuuucauauauaugauuuggcuuaguucccaaauuauaaugaauuacauaguucauau
((((((...(((((.((((((.....(((((((....))))))).....((((((((((........)))))))))))))))).)))))..))))))

Structure
      UGA     C      Acggagagaguuaaccaacuuucauaua          cuu 
GUGUGA   UGUGU AUUUAU                            uaugauuugg   a
||||||   ||||| ||||||                            ||||||||||    
uauacu   auaca uaagua                            auauuaaacc   g
      -ug     u      ----------------------------          cuu 


Annotation confidence Not enough data
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Genome context
chr5: 9362559-9362655 [-]

Database links

Mature ath-miR8177

Accession MIMAT0032776
Description Arabidopsis thaliana ath-miR8177 mature miRNA
Sequence 1 - GUGUGAUGAUGUGUCAUUUAUA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701