miRBase entry: ath-MIR8179

Stem-loop ath-MIR8179


Accession
MI0026809
Description
Arabidopsis thaliana ath-MIR8179 precursor miRNA


Sequence

caccgaaucauauUGACUGCAUUAACUUGAUCGUugguuguuaagauggauauuugucuuaacaaccaacgaucaaguuaaugcagccaaucugaucuucuuauuaaggug
((((..((((.((((.(((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))).)))).))))...........))))

Structure
    ---------ga    u    A                                 a 
cacc           auca auUG CUGCAUUAACUUGAUCGUugguuguuaagaugg u
||||           |||| |||| |||||||||||||||||||||||||||||||||  
gugg           uagu uaac gacguaauugaacuagcaaccaacaauucuguu a
    aauuauucuuc    c    c                                 u 


Annotation confidence Not enough data
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Genome context
chr4: 7161853-7161963 [-]

Database links

Mature ath-miR8179

Accession MIMAT0032778
Description Arabidopsis thaliana ath-miR8179 mature miRNA
Sequence 14 - UGACUGCAUUAACUUGAUCGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701