miRBase entry: sja-mir-8185

Stem-loop sja-mir-8185


Accession
MI0026815
Description
Schistosoma japonicum sja-mir-8185 precursor miRNA

Literature search
1 open access papers mention sja-mir-8185
(3 sentences)

Sequence

cggauaugcugcugcuccuucagcugaugucucauagaaucuaguggcagguggAGGAUCGAUGAACGGAGCAUUaggaugcacu
.(..(((.(((.((((((((((..((((.((((......((....))......)))))))).)))).)))))).))).)))..).

Structure
c ga   g   c      -    gc    g    auagaa  u 
 g  uau cug ugcucc uuca  ugau ucuc      uc a
 |  ||| ||| |||||| ||||  |||| ||||      ||  
 c  gua gaU ACGAGG AAGU  GCUA GGAg      gg g
u ac   g   U      C    -A    -    guggac  u 


Annotation confidence Not enough data
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Genome context
CABF01050135.1: 8914-8998 [-]

Database links

Mature sja-miR-8185

Accession MIMAT0032784
Description Schistosoma japonicum sja-miR-8185 mature miRNA
Sequence 55 - AGGAUCGAUGAACGGAGCAUU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23942009
    Deep sequencing-based identification of pathogen-specific microRNAs in the plasma of rabbits infected with Schistosoma japonicum
    "Cheng G, Luo R, Hu C, Cao J, Jin Y"
    "Parasitology (2013) 140:1751-1761