miRBase entry: cel-mir-8187

Stem-loop cel-mir-8187


Accession
MI0026818
Description
Caenorhabditis elegans cel-mir-8187 precursor miRNA


Sequence

694 reads, 4 reads per million, 9 experiments
UCGGGAAUGCCUACGCCUGCuuaccugccuauuaggcauggaauaggcacguaggcAGGCAAGAUGUAGGCACGAUG
(((....(((((((((((((((((.((((((((........)))))))).)))))))))).....))))))))))..

Structure
--   GGAA       -----          c        agg 
  UCG    UGCCUAC     GCCUGCuuac ugccuauu   c
  |||    |||||||     |||||||||| ||||||||    
  AGC    ACGGAUG     CGGAcggaug acggauaa   a
GU   ----       UAGAA          c        ggu 


Annotation confidence Not enough data
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Genome context
chrI: 14368397-14368473 [-]

Database links

Mature cel-miR-8187-5p

Accession MIMAT0032787
Description Caenorhabditis elegans cel-miR-8187-5p mature miRNA
Sequence 1 - UCGGGAAUGCCUACGCCUGC - 20
Evidence experimental
SOLiD [1]

Mature cel-miR-8187-3p

Accession MIMAT0032788
Description Caenorhabditis elegans cel-miR-8187-3p mature miRNA
Sequence 57 - AGGCAAGAUGUAGGCACGAUG - 77
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260