Stem-loop cel-mir-8192

Accession

MI0026823

Description

Caenorhabditis elegans cel-mir-8192 precursor miRNA

Sequence

23 reads, 1 reads per million, 7 experiments

CGGUCGAGCGAGUCUCAGUCGGCcguggcggugcguugaugccugcuuguguggcCGAAAGAGACUCAUUGGGCCUGC
.((((.((.(((((((..(((((((.(((((.((......)))))))....)))))))..))))))).)).))))...

Structure

--C    G  C       AG       ---u     u  gu 
   GGUC AG GAGUCUC  UCGGCcg    ggcgg gc  u
   |||| || |||||||  |||||||    ||||| ||   
   CCGG UU CUCAGAG  AGCcggu    ucguc cg  g
CGU    G  A       AA       gugu     -  ua 

Annotation confidence Not enough data

Genome context

chrII: 6943941-6944018 [+]

Mature cel-miR-8192-5p

• Accession: MIMAT0032797
• Description: Caenorhabditis elegans cel-miR-8192-5p mature miRNA
• Sequence: 1 - CGGUCGAGCGAGUCUCAGUCGGC - 23
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8192-3p

• Accession: MIMAT0032798
• Description: Caenorhabditis elegans cel-miR-8192-3p mature miRNA
• Sequence: 56 - CGAAAGAGACUCAUUGGGCCUGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260