miRBase entry: cel-mir-8200

Stem-loop cel-mir-8200


Accession
MI0026831
Description
Caenorhabditis elegans cel-mir-8200 precursor miRNA


Sequence

41 reads, 7 reads per million, 5 experiments
UGGCUCAAAUCUCCAGUCAGACCcugaugugggUCUGACGGGAGAUUUGAGCCAUC
((((((((((((((.(((((((((......))))))))).))))))))))))))..

Structure
--              A         ug 
  UGGCUCAAAUCUCC GUCAGACCc  a
  |||||||||||||| |||||||||   
  ACCGAGUUUAGAGG CAGUCUggg  u
CU              G         ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrV: 3057062-3057117 [+]

Database links

Mature cel-miR-8200-5p

Accession MIMAT0032813
Description Caenorhabditis elegans cel-miR-8200-5p mature miRNA
Sequence 1 - UGGCUCAAAUCUCCAGUCAGACC - 23
Evidence experimental
Illumina [1]

Mature cel-miR-8200-3p

Accession MIMAT0032814
Description Caenorhabditis elegans cel-miR-8200-3p mature miRNA
Sequence 34 - UCUGACGGGAGAUUUGAGCCAUC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260