miRBase entry: cel-mir-8205

Stem-loop cel-mir-8205


Accession
MI0026838
Description
Caenorhabditis elegans cel-mir-8205 precursor miRNA


Sequence

77 reads, 1 reads per million, 11 experiments
UGGCAGACUUCGUUGAGGCUAugacuacaaacuacaauuuucguUUAGCCUCACCCAGUUUUCCACG
(((.(((((..((.(((((((.(((.................))))))))))))..))))).)))..

Structure
--   C     UC  U       u   uacaaac 
  UGG AGACU  GU GAGGCUA gac       u
  ||| |||||  || ||||||| |||       a
  ACC UUUGA  CA CUCCGAU Uug       c
GC   U     CC  -       -   cuuuuaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrI: 13629835-13629901 [+]

Database links

Mature cel-miR-8205-5p

Accession MIMAT0032827
Description Caenorhabditis elegans cel-miR-8205-5p mature miRNA
Sequence 1 - UGGCAGACUUCGUUGAGGCUA - 21
Evidence experimental
SOLiD [1]

Mature cel-miR-8205-3p

Accession MIMAT0032828
Description Caenorhabditis elegans cel-miR-8205-3p mature miRNA
Sequence 45 - UUAGCCUCACCCAGUUUUCCACG - 67
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260