miRBase entry: cel-mir-2217b-3

Stem-loop cel-mir-2217b-3


Accession
MI0026846
Description
Caenorhabditis elegans cel-mir-2217b-3 precursor miRNA
Gene family
MIPF0001912; mir-2217


Sequence

49 reads, 1 reads per million, 10 experiments
CAGAGUGGGCAGUCGGUGUCAAUCugcaacaauagcaggUUGACCCUUGUGCUUGUUUCGGC
..(((.(((((...((.((((((((((.......))))))))))))...)))))..)))...

Structure
-CA   -U     GUC  U          aa 
   GAG  GGGCA   GG GUCAAUCugc  c
   |||  |||||   || ||||||||||  a
   CUU  UUCGU   CC CAGUUggacg  a
CGG   UG     GUU  -          au 


Annotation confidence Not enough data
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Genome context
chrIV: 14452441-14452502 [-]

Database links

Mature cel-miR-2217b-3p

Accession MIMAT0032840
Description Caenorhabditis elegans cel-miR-2217b-3p mature miRNA
Sequence 40 - UUGACCCUUGUGCUUGUUUCGGC - 62
Evidence experimental
Illumina [1]

Mature cel-miR-2217b-5p

Accession MIMAT0032841
Description Caenorhabditis elegans cel-miR-2217b-5p mature miRNA
Sequence 1 - CAGAGUGGGCAGUCGGUGUCAAUC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260