Stem-loop cel-mir-8211

Accession

MI0026847

Description

Caenorhabditis elegans cel-mir-8211 precursor miRNA

Sequence

27 reads, 1 reads per million, 8 experiments

ACUCGAGGCCGGUGAGCUGCgugaaauggccggcuaucuauuACGGCUCGCCGAGCUUCGAGAAC
.((((((((((((((((..(((((.((((....))))...))))))))))))).))))))))...

Structure

--A        -        UG     --a    c 
   CUCGAGGC CGGUGAGC  Cguga   augg c
   |||||||| ||||||||  |||||   ||||  
   GAGCUUCG GCCGCUCG  GCAuu   uauc g
CAA        A        --     auc    g 

Annotation confidence Not enough data

Genome context

chrIII: 11936916-11936980 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-8211

Mature cel-miR-8211-5p

• Accession: MIMAT0032842
• Description: Caenorhabditis elegans cel-miR-8211-5p mature miRNA
• Sequence: 1 - ACUCGAGGCCGGUGAGCUGC - 20
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8211-3p

• Accession: MIMAT0032843
• Description: Caenorhabditis elegans cel-miR-8211-3p mature miRNA
• Sequence: 43 - ACGGCUCGCCGAGCUUCGAGAAC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260