miRBase entry: ppc-mir-8214

Stem-loop ppc-mir-8214


Accession
MI0026856
Description
Pristionchus pacificus ppc-mir-8214 precursor miRNA


Sequence

GUGAGAUUCUACCACUGACACCcauuaaauugcguUGUCAUGGUACAAUCUUGCAG
((((((((.(((((.(((((.(((......)).).)))))))))).))))))))..

Structure
--        C     C     C -  uu 
  GUGAGAUU UACCA UGACA C ca  a
  |||||||| ||||| ||||| | ||   
  CGUUCUAA AUGGU ACUGU g gu  a
GA        C     -     u c  ua 


Annotation confidence Not enough data
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Genome context
ABKE03000119.1: 992647-992702 [-]

Database links

Mature ppc-miR-8214-5p

Accession MIMAT0032858
Description Pristionchus pacificus ppc-miR-8214-5p mature miRNA
Sequence 1 - GUGAGAUUCUACCACUGACACC - 22
Evidence experimental
Illumina [1], SOLiD [1]

Mature ppc-miR-8214-3p

Accession MIMAT0032859
Description Pristionchus pacificus ppc-miR-8214-3p mature miRNA
Sequence 36 - UGUCAUGGUACAAUCUUGCAG - 56
Evidence experimental
Illumina [1], SOLiD [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260