Stem-loop ppc-mir-83

Accession

MI0026870

Description

Pristionchus pacificus ppc-mir-83 precursor miRNA

Sequence

CCCGUAUUUCCGUGCGUGCUUGAccgauggaauggcucUAGCACCAUGCAAAUUCGGCGU
.(((.((((.((((.(((((.((((........)).)).))))))))).)))).)))...

Structure

--C   U    C    C     U  -  gau 
   CCG AUUU CGUG GUGCU GA cc   g
   ||| |||| |||| ||||| || ||    
   GGC UAAA GUAC CACGA cu gg   g
UGC   U    C    -     U  c  uaa 

Annotation confidence Not enough data

Genome context

ABKE03000076.1: 2054138-2054197 [-]

Mature ppc-miR-83-5p

• Accession: MIMAT0032886
• Description: Pristionchus pacificus ppc-miR-83-5p mature miRNA
• Sequence: 1 - CCCGUAUUUCCGUGCGUGCUUGA - 23
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-83-3p

• Accession: MIMAT0032887
• Description: Pristionchus pacificus ppc-miR-83-3p mature miRNA
• Sequence: 39 - UAGCACCAUGCAAAUUCGGCGU - 60
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260