miRBase entry: ppc-mir-8364j

Stem-loop ppc-mir-8364j


Accession
MI0026941
Description
Pristionchus pacificus ppc-mir-8364j precursor miRNA
Gene family
MIPF0001877; mir-8364


Sequence

UCUUCAUUUCUCACGUGCUCUCUcaccggucagagaggcgaGAGAGUGUGCGAAAUGAAGAGA
((((((((((.(((..((((((((.((.........)).))))))))))).))))))))))..

Structure
--          U   GU        a  ggu 
  UCUUCAUUUC CAC  GCUCUCUc cc   c
  |||||||||| |||  |||||||| ||   a
  AGAAGUAAAG GUG  UGAGAGag gg   g
AG          C   --        c  aga 


Annotation confidence Not enough data
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Genome context
ABKE03000123.1: 2022636-2022698 [-]

Database links

Mature ppc-miR-8364j-5p

Accession MIMAT0033026
Description Pristionchus pacificus ppc-miR-8364j-5p mature miRNA
Sequence 1 - UCUUCAUUUCUCACGUGCUCUCU - 23
Evidence experimental
Illumina [1]

Mature ppc-miR-8364j-3p

Accession MIMAT0033027
Description Pristionchus pacificus ppc-miR-8364j-3p mature miRNA
Sequence 42 - GAGAGUGUGCGAAAUGAAGAGA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260