miRBase entry: ppc-mir-8287

Stem-loop ppc-mir-8287


Accession
MI0026970
Description
Pristionchus pacificus ppc-mir-8287 precursor miRNA


Sequence

ACUUCACAAGUGUAUUUCUACCGuagccuuuccagguacggUAGAAAUACACUUGUGAACACU
..(((((((((((((((((((((((.(((....))))))))))))))))))))))))))....

Structure
--AC                       g   u 
    UUCACAAGUGUAUUUCUACCGua ccu u
    ||||||||||||||||||||||| |||  
    AAGUGUUCACAUAAAGAUggcau gga c
UCAC                       -   c 


Annotation confidence Not enough data
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Genome context
ABKE03000093.1: 7818985-7819047 [-]

Database links

Mature ppc-miR-8287-5p

Accession MIMAT0033083
Description Pristionchus pacificus ppc-miR-8287-5p mature miRNA
Sequence 1 - ACUUCACAAGUGUAUUUCUACCG - 23
Evidence experimental
Illumina [1]

Mature ppc-miR-8287-3p

Accession MIMAT0033084
Description Pristionchus pacificus ppc-miR-8287-3p mature miRNA
Sequence 42 - UAGAAAUACACUUGUGAACACU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260