miRBase entry: ppc-mir-8364g

Stem-loop ppc-mir-8364g


Accession
MI0026989
Description
Pristionchus pacificus ppc-mir-8364g precursor miRNA
Gene family
MIPF0001877; mir-8364


Sequence

UCUUCAUUUCCCACACUCUCUcaccggucagagaggcgAGAGAGUGUGGAAAAGGAAGAGA
(((((.(((.((((((((((((.((.........)).)))))))))))).))).)))))..

Structure
--     A   C            a  ggu 
  UCUUC UUU CCACACUCUCUc cc   c
  ||||| ||| |||||||||||| ||   a
  AGAAG AAA GGUGUGAGAGAg gg   g
AG     G   A            c  aga 


Annotation confidence Not enough data
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Genome context
ABKE03000060.1: 5680543-5680603 [-]

Database links

Mature ppc-miR-8364g-5p

Accession MIMAT0033119
Description Pristionchus pacificus ppc-miR-8364g-5p mature miRNA
Sequence 1 - UCUUCAUUUCCCACACUCUCU - 21
Evidence experimental
Illumina [1]

Mature ppc-miR-8364g-3p

Accession MIMAT0033120
Description Pristionchus pacificus ppc-miR-8364g-3p mature miRNA
Sequence 39 - AGAGAGUGUGGAAAAGGAAGAGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260