Stem-loop ppc-mir-8326

Accession

MI0027029

Description

Pristionchus pacificus ppc-mir-8326 precursor miRNA

Sequence

AGGGACAUCGCAAUGAGACUUCuguuuuuuaucgagaUGUCUCACAACGAUGUCCCUGA
((((((((((...((((((.(((...........))).))))))...))))))))))..

Structure

--          CAA      U   guuu 
  AGGGACAUCG   UGAGAC UCu    u
  ||||||||||   |||||| |||    u
  UCCCUGUAGC   ACUCUG aga    u
AG          AAC      U   gcua 

Annotation confidence Not enough data

Genome context

ABKE03000060.1: 4988021-4988079 [+]

Mature ppc-miR-8326-5p

• Accession: MIMAT0033196
• Description: Pristionchus pacificus ppc-miR-8326-5p mature miRNA
• Sequence: 1 - AGGGACAUCGCAAUGAGACUUC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8326-3p

• Accession: MIMAT0033197
• Description: Pristionchus pacificus ppc-miR-8326-3p mature miRNA
• Sequence: 38 - UGUCUCACAACGAUGUCCCUGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260