miRBase entry: ppc-mir-8327

Stem-loop ppc-mir-8327


Accession
MI0027030
Description
Pristionchus pacificus ppc-mir-8327 precursor miRNA


Sequence

AGGUUUUGUAUUUCGUUUUUUUACUugaauauuggaagcaagUAUGACGGAUUUGCAAGAUCUGU
((((((((((.((((((....((((((...........)))))).))))))..))))))))))..

Structure
--          -U      UUUU      aaua 
  AGGUUUUGUA  UUCGUU    UACUug    u
  ||||||||||  ||||||    ||||||    u
  UCUAGAACGU  AGGCAG    AUgaac    g
UG          UU      ---U      gaag 


Annotation confidence Not enough data
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Genome context
ABKE03000038.1: 1153480-1153544 [-]

Database links

Mature ppc-miR-8327-5p

Accession MIMAT0033198
Description Pristionchus pacificus ppc-miR-8327-5p mature miRNA
Sequence 1 - AGGUUUUGUAUUUCGUUUUUUUACU - 25
Evidence experimental
Illumina [1]

Mature ppc-miR-8327-3p

Accession MIMAT0033199
Description Pristionchus pacificus ppc-miR-8327-3p mature miRNA
Sequence 43 - UAUGACGGAUUUGCAAGAUCUGU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260