miRBase entry: ppc-mir-8341

Stem-loop ppc-mir-8341


Accession
MI0027045
Description
Pristionchus pacificus ppc-mir-8341 precursor miRNA


Sequence

GUAGAGCAUCUCGGCCGACCGCggaaacgcGGCCUCCAGCUUGUUGUACG
(((.((((.((.((..(.(((((....))))))..))))..)))).))).

Structure
-   G    -U  C  CC A     g 
 GUA AGCA  CU GG  G CCGCg a
 ||| ||||  || ||  | |||||  
 CAU UUGU  GA CC  C GGcgc a
G   G    UC  -  UC -     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ABKE03000059.1: 689245-689294 [-]

Database links

Mature ppc-miR-8341-5p

Accession MIMAT0033227
Description Pristionchus pacificus ppc-miR-8341-5p mature miRNA
Sequence 1 - GUAGAGCAUCUCGGCCGACCGC - 22
Evidence experimental
Illumina [1]

Mature ppc-miR-8341-3p

Accession MIMAT0033228
Description Pristionchus pacificus ppc-miR-8341-3p mature miRNA
Sequence 31 - GGCCUCCAGCUUGUUGUACG - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260