miRBase entry: ppc-mir-8360

Stem-loop ppc-mir-8360


Accession
MI0027073
Description
Pristionchus pacificus ppc-mir-8360 precursor miRNA


Sequence

CCGGCGAGAGACCAUGAGACAGUgagcucucucaauUGUCCAUGCUCUCUCGUCGAUC
.((((((((((.((((.(((((((((....))).)))))))))).))))))))))...

Structure
--C          C    A      -   c 
   CGGCGAGAGA CAUG GACAGU gag u
   |||||||||| |||| |||||| |||  
   GCUGCUCUCU GUAC CUGUua cuc c
CUA          C    -      a   u 


Annotation confidence Not enough data
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Genome context
ABKE03000021.1: 3048810-3048867 [+]

Database links

Mature ppc-miR-8360-5p

Accession MIMAT0033282
Description Pristionchus pacificus ppc-miR-8360-5p mature miRNA
Sequence 1 - CCGGCGAGAGACCAUGAGACAGU - 23
Evidence experimental
Illumina [1]

Mature ppc-miR-8360-3p

Accession MIMAT0033283
Description Pristionchus pacificus ppc-miR-8360-3p mature miRNA
Sequence 37 - UGUCCAUGCUCUCUCGUCGAUC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260