miRBase entry: str-mir-81b

Stem-loop str-mir-81b


Accession
MI0027105
Description
Strongyloides ratti str-mir-81b precursor miRNA


Sequence

AUGGGCCUAUGUGUGUCUCGUGguggauuuuaugauauagccaUGAGAUCAUAUUAGACCCAUCU
(((((.(((.((((((((((((((..(((....)))...))))))))).)))))))).)))))..

Structure
--     C   U     -         -gg   u 
  AUGGG CUA GUGUG UCUCGUGgu   auu u
  ||||| ||| ||||| |||||||||   |||  
  UACCC GAU UAUAC AGAGUaccg   uag a
UC     A   -     U         aua   u 


Annotation confidence Not enough data
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Genome context
Sratti_scf00003_Chr01: 2844172-2844236 [+]

Database links

Mature str-miR-81b-5p

Accession MIMAT0033342
Description Strongyloides ratti str-miR-81b-5p mature miRNA
Sequence 1 - AUGGGCCUAUGUGUGUCUCGUG - 22
Evidence experimental
Illumina [1]

Mature str-miR-81b-3p

Accession MIMAT0033343
Description Strongyloides ratti str-miR-81b-3p mature miRNA
Sequence 44 - UGAGAUCAUAUUAGACCCAUCU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260