miRBase entry: str-mir-86

Stem-loop str-mir-86


Accession
MI0027111
Description
Strongyloides ratti str-mir-86 precursor miRNA


Sequence

UAAGUGAAUGCUUUGCCACAGUCUugaauuuagaauccuagCCUGCUGCAACAUUCACUUGGC
((((((((((..((((..(((.((.((........))..)).)))..))))))))))))))..

Structure
--          CU    CA   U  -u  auu 
  UAAGUGAAUG  UUGC  CAG CU  ga   u
  ||||||||||  ||||  ||| ||  ||    
  GUUCACUUAC  AACG  GUC ga  cu   a
CG          --    UC   C  uc  aag 


Annotation confidence Not enough data
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Genome context
Sratti_scf00002_Chr02: 1950518-1950580 [-]

Database links

Mature str-miR-86-5p

Accession MIMAT0033354
Description Strongyloides ratti str-miR-86-5p mature miRNA
Sequence 1 - UAAGUGAAUGCUUUGCCACAGUCU - 24
Evidence experimental
Illumina [1]

Mature str-miR-86-3p

Accession MIMAT0033355
Description Strongyloides ratti str-miR-86-3p mature miRNA
Sequence 42 - CCUGCUGCAACAUUCACUUGGC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260