miRBase entry: str-mir-8376

Stem-loop str-mir-8376


Accession
MI0027131
Description
Strongyloides ratti str-mir-8376 precursor miRNA


Sequence

UACUCAGUACGUAACAAAGAUUaauuaaauacaaauaucUUUGCAACGUAUCUGGGUUUAC
.(((((((((((..(((((((...............)))))))..))))).))))))....

Structure
---U      -     AA       Uaauua 
    ACUCAG UACGU  CAAAGAU      a
    |||||| |||||  |||||||      a
    UGGGUC AUGCA  GUUUcua      u
CAUU      U     AC       uaaaca 


Annotation confidence Not enough data
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Genome context
Sratti_scf00001_ChrX: 2080639-2080699 [-]
Clustered miRNAs
10 other miRNAs are < 10 kb from str-mir-8376
Name Accession Chromosome Start End Strand Confidence




Database links

Mature str-miR-8376-5p

Accession MIMAT0033394
Description Strongyloides ratti str-miR-8376-5p mature miRNA
Sequence 1 - UACUCAGUACGUAACAAAGAUU - 22
Evidence experimental
Illumina [1]

Mature str-miR-8376-3p

Accession MIMAT0033395
Description Strongyloides ratti str-miR-8376-3p mature miRNA
Sequence 40 - UUUGCAACGUAUCUGGGUUUAC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260