miRBase entry: str-mir-8382

Stem-loop str-mir-8382


Accession
MI0027144
Description
Strongyloides ratti str-mir-8382 precursor miRNA


Sequence

UGGAAUUCUAAGAAGCGAAACAAGAUAAUaauaguUUUGGCACUUAAGAAUUCCACU
((((((((((((...((((((............))))))...))).)))))))))..

Structure
--         -   AAG      AAGAU 
  UGGAAUUCU AAG   CGAAAC     A
  ||||||||| |||   ||||||      
  ACCUUAAGA UUC   GUUUug     A
UC         A   ACG      auaaU 


Annotation confidence Not enough data
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Genome context
Sratti_scf00001_Chr02: 3569023-3569079 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from str-mir-8382
Name Accession Chromosome Start End Strand Confidence




Database links

Mature str-miR-8382-5p

Accession MIMAT0033420
Description Strongyloides ratti str-miR-8382-5p mature miRNA
Sequence 1 - UGGAAUUCUAAGAAGCGAAACAAGAUAAU - 29
Evidence experimental
Illumina [1]

Mature str-miR-8382-3p

Accession MIMAT0033421
Description Strongyloides ratti str-miR-8382-3p mature miRNA
Sequence 36 - UUUGGCACUUAAGAAUUCCACU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260