miRBase entry: str-mir-8391

Stem-loop str-mir-8391


Accession
MI0027159
Description
Strongyloides ratti str-mir-8391 precursor miRNA


Sequence

UUGUGGAGUCGUGGAAAAAUGuagaauaugaacucaUCAAUCCUCGUACUUCACAACA
(((((((((((.(((...(((.((........)))))...))).)).)))))))))..

Structure
--         -  U   AAA   u  aau 
  UUGUGGAGU CG GGA   AUG ag   a
  ||||||||| || |||   ||| ||    
  AACACUUCA GC CCU   Uac uc   u
AC         U  U   AAC   -  aag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Sratti_scf00001_Chr01: 3269754-3269811 [+]

Database links

Mature str-miR-8391-5p

Accession MIMAT0033450
Description Strongyloides ratti str-miR-8391-5p mature miRNA
Sequence 1 - UUGUGGAGUCGUGGAAAAAUG - 21
Evidence experimental
Illumina [1]

Mature str-miR-8391-3p

Accession MIMAT0033451
Description Strongyloides ratti str-miR-8391-3p mature miRNA
Sequence 37 - UCAAUCCUCGUACUUCACAACA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260