Stem-loop str-mir-8395

Accession

MI0027174

Description

Strongyloides ratti str-mir-8395 precursor miRNA

Sequence

ACGACCUUAUUUUGUCUUCAAcauaauuuuagagauguuUAAGGCAUUUUAAGGUUGUUC
(((((((((...((((((.(((((..........))))).))))))...)))))))))..

Structure

--         UUU      C     aauu 
  ACGACCUUA   UGUCUU AAcau    u
  |||||||||   |||||| |||||     
  UGUUGGAAU   ACGGAA uugua    u
CU         UUU      U     gaga 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 4550580-4550639 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8395

Mature str-miR-8395-5p

• Accession: MIMAT0033480
• Description: Strongyloides ratti str-miR-8395-5p mature miRNA
• Sequence: 1 - ACGACCUUAUUUUGUCUUCAA - 21
• Evidence: experimental ; Illumina [1]

Mature str-miR-8395-3p

• Accession: MIMAT0033481
• Description: Strongyloides ratti str-miR-8395-3p mature miRNA
• Sequence: 40 - UAAGGCAUUUUAAGGUUGUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260