miRBase entry: str-mir-8397

Stem-loop str-mir-8397


Accession
MI0027178
Description
Strongyloides ratti str-mir-8397 precursor miRNA


Sequence

AGGUGUAGAUUGCCAUUCAACUGuuaagaaaaaacuguUGAAAGACGUUCUAUAUCUCU
(((((((((.((.(.((((((.(((.......))).)))))).).)).)))))))))..

Structure
--         U  C A      U   aa 
  AGGUGUAGA UG C UUCAAC Guu  g
  ||||||||| || | |||||| |||  a
  UCUAUAUCU GC G AAGUug caa  a
UC         U  A A      u   aa 


Annotation confidence Not enough data
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Genome context
Sratti_scf00004_ChrX: 93133-93191 [+]

Database links

Mature str-miR-8397-5p

Accession MIMAT0033488
Description Strongyloides ratti str-miR-8397-5p mature miRNA
Sequence 1 - AGGUGUAGAUUGCCAUUCAACUG - 23
Evidence experimental
Illumina [1]

Mature str-miR-8397-3p

Accession MIMAT0033489
Description Strongyloides ratti str-miR-8397-3p mature miRNA
Sequence 39 - UGAAAGACGUUCUAUAUCUCU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260